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BABEL


Open Babel 1.100.2 -- Feb 22 2004 -- 16:13:48
Usage: babel [-i<input-type>] <name> [-o<output-type>] <name>

Currently supported input types
	alc -- Alchemy file
	prep -- Amber PREP file
	bs -- Ball & Stick file
	caccrt -- Cacao Cartesian file
	ccc -- CCC file
	c3d1 -- Chem3D Cartesian 1 file
	c3d2 -- Chem3D Cartesian 2 file
	cml -- Chemical Markup Language file
	crk2d -- CRK2D: Chemical Resource Kit 2D file
	crk3d -- CRK3D: Chemical Resource Kit 3D file
	box -- Dock 3.5 Box file
	dmol -- DMol3 Coordinates file
	feat -- Feature file
	gam -- GAMESS Output file
	gamout -- GAMESS Output file
	gpr -- Ghemical Project file
	mm1gp -- Ghemical MM file
	qm1gp -- Ghemical QM file
	hin -- HyperChem HIN file
	jout -- Jaguar Output file
	bin -- OpenEye Binary file
	mmd -- MacroModel file
	mmod -- MacroModel file
	out -- MacroModel file
	dat -- MacroModel file
	car -- MSI Biosym/Insight II CAR file
	sdf -- MDL Isis SDF file
	sd -- MDL Isis SDF file
	mdl -- MDL Molfile file
	mol -- MDL Molfile file
	mopcrt -- MOPAC Cartesian file
	mopout -- MOPAC Output file
	mmads -- MMADS file
	mpqc -- MPQC file
	bgf -- MSI BGF file
	nwo -- NWChem Output file
	pdb -- PDB file
	ent -- PDB file
	pqs -- PQS file
	qcout -- Q-Chem Output file
	res -- ShelX file
	ins -- ShelX file
	smi -- SMILES file
	mol2 -- Sybyl Mol2 file
	unixyz -- UniChem XYZ file
	vmol -- ViewMol file
	xyz -- XYZ file

Currently supported output types
	alc -- Alchemy file
	bs -- Ball & Stick file
	caccrt -- Cacao Cartesian file
	cacint -- Cacao Internal file
	cache -- CAChe MolStruct file
	c3d1 -- Chem3D Cartesian 1 file
	c3d2 -- Chem3D Cartesian 2 file
	ct -- ChemDraw Connection Table file
	cht -- Chemtool file
	cml -- Chemical Markup Language file
	crk2d -- CRK2D: Chemical Resource Kit 2D file
	crk3d -- CRK3D: Chemical Resource Kit 3D file
	cssr -- CSD CSSR file
	box -- Dock 3.5 Box file
	dmol -- DMol3 Coordinates file
	feat -- Feature file
	fh -- Fenske-Hall Z-Matrix file
	gamin -- GAMESS Input file
	inp -- GAMESS Input file
	gcart -- Gaussian Cartesian file
	gau -- Gaussian Input file
	gpr -- Ghemical Project file
	gr96a -- GROMOS96 (A) file
	gr96n -- GROMOS96 (nm) file
	hin -- HyperChem HIN file
	jin -- Jaguar Input file
	bin -- OpenEye Binary file
	mmd -- MacroModel file
	mmod -- MacroModel file
	out -- MacroModel file
	dat -- MacroModel file
	sdf -- MDL Isis SDF file
	sd -- MDL Isis SDF file
	mdl -- MDL Molfile file
	mol -- MDL Molfile file
	mopcrt -- MOPAC Cartesian file
	mmads -- MMADS file
	bgf -- MSI BGF file
	csr -- MSI Quanta CSR file
	nw -- NWChem Input file
	pdb -- PDB file
	ent -- PDB file
	pov -- POV-Ray Output file
	pqs -- PQS file
	report -- Report file
	qcin -- Q-Chem Input file
	smi -- SMILES file
	fix -- SMILES Fix file
	mol2 -- Sybyl Mol2 file
	txyz -- Tinker XYZ file
	txt -- Titles file
	unixyz -- UniChem XYZ file
	vmol -- ViewMol file
	xed -- XED file
	xyz -- XYZ file
	zin -- ZINDO Input file
Additional options : 
 -f <#> Start import at molecule # specified 
 -l <#> End import at molecule # specified 
 -d Delete Hydrogens 
 -h Add Hydrogens 
 -hpH Add Hydrogens appropriate for pH (use transforms in phmodel.txt) 
 -c Center Coordinates 
 -x[flags] XML.CML options (e.g. -x1ac)  
   1 output CML V1.0 (default)
   2 output CML V2.0 (Schema)
   a output array format for atoms and bonds (default <atom>)
   p prettyprint output (not implemented)
   n output namespace (default no namespace)
   c use 'cml' as output namespace prefix (else default) (forces n)
   d output DOCTYPE (default none)
   g debug output
   v add XML version (declaration)

Report Bugs to openbabel-discuss@lists.sourceforge.net.