OBVirtualBond Class Reference

Used to temporarily store bonds that reference an atom that has not yet been added to a molecule. More...

#include <openbabel/generic.h>

Inheritance diagram for OBVirtualBond:

List of all members.

Public Member Functions
	OBVirtualBond ()
virtual OBGenericData *	Clone (OBBase *) const
	OBVirtualBond (int, int, int, int stereo=0)
int	GetBgn ()
int	GetEnd ()
int	GetOrder ()
int	GetStereo ()
void	SetAttribute (const std::string &v)
void	SetOrigin (const DataOrigin s)
virtual const std::string &	GetAttribute () const
unsigned int	GetDataType () const
virtual const std::string &	GetValue () const
virtual DataOrigin	GetOrigin () const
Protected Attributes
int	_bgn
int	_end
int	_ord
int	_stereo
std::string	_attr
unsigned int	_type
DataOrigin	_source

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Detailed Description

Used to temporarily store bonds that reference an atom that has not yet been added to a molecule.

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Constructor & Destructor Documentation

OBVirtualBond

(

)

OBVirtualBond	(	int	bgn,
		int	end,
		int	ord,
		int	stereo = 0
	)

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Member Function Documentation

virtual OBGenericData* Clone

(

OBBase *

)

const [inline, virtual]

Reimplemented from OBGenericData.

int GetBgn

(

)

[inline]

Referenced by OBMol::AddAtom(), and OBMol::NewAtom().

int GetEnd

(

)

[inline]

Referenced by OBMol::AddAtom(), and OBMol::NewAtom().

int GetOrder

(

)

[inline]

Referenced by OBMol::AddAtom(), and OBMol::NewAtom().

int GetStereo

(

)

[inline]

void SetAttribute

(

const std::string &

v )

[inline, inherited]

Set the attribute (key), which can be used to retrieve this data.

Referenced by OBGastChrg::AssignPartialCharges(), OBMol::DoTransformations(), OBMol::FindLSSR(), OBMol::FindSSSR(), OBForceField::GetAtomTypes(), OBMol::GetFormula(), OBMol::GetLSSR(), OBForceField::GetPartialCharges(), OBMol::GetSSSR(), OBDescriptor::PredictAndSave(), and OBMol::SetFormula().

void SetOrigin

(

const DataOrigin

s )

[inline, inherited]

Set the origin of this data, which can be used to filter the data.

Referenced by OBGastChrg::AssignPartialCharges(), OpenBabel::CalcSignedVolume(), OBMol::FindAngles(), OBMol::FindLSSR(), OBMol::FindSSSR(), OBMol::FindTorsions(), OBMol::GetFormula(), OBMol::GetLSSR(), OBMol::GetSSSR(), OBDescriptor::PredictAndSave(), and OBMol::SetFormula().

virtual const std::string& GetAttribute

(

)

const [inline, virtual, inherited]

Returns:

The attribute (key), which can be used to retrieve this data

Referenced by OBMoleculeFormat::MakeCombinedMolecule().

unsigned int GetDataType

(

)

const [inline, inherited]

Returns:

the data type for this object as defined in OBGenericDataType

virtual const std::string& GetValue

(

)

const [inline, virtual, inherited]

Base class returns a default value (the attribute type) but should never be called.

Reimplemented in OBCommentData, and OBPairData.

Referenced by OBDepict::DrawMolecule(), OBDescriptor::FilterCompare(), and OBDescriptor::GetValues().

virtual DataOrigin GetOrigin

(

)

const [inline, virtual, inherited]

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Member Data Documentation

int _bgn [protected]

int _end [protected]

int _ord [protected]

int _stereo [protected]

std::string _attr [protected, inherited]

attribute tag (e.g., "UnitCell", "Comment" or "Author")

Referenced by OBRotamerList::Clone(), and OBNasaThermoData::OBNasaThermoData().

unsigned int _type [protected, inherited]

attribute type -- declared for each subclass

Referenced by OBRotamerList::Clone(), and OBNasaThermoData::OBNasaThermoData().

DataOrigin _source [protected, inherited]

source of data for accounting

Referenced by OBChiralData::operator=(), OBTorsionData::operator=(), OBAngleData::operator=(), OBConformerData::operator=(), and OBSymmetryData::operator=().

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The documentation for this class was generated from the following files:

• generic.h
• generic.cpp