Molecular dynamics and docking formats

• Amber Prep format (prep)
  • Read Options
• AutoDock PDBQT format (pdbqt)
  • Read Options
  • Write Options
• DL-POLY CONFIG (CONFIG)
• DL-POLY HISTORY (HISTORY)
• Dock 3.5 Box format (box)
• GRO format (gro)
  • Read Options
• GROMOS96 format (gr96)
  • Write Options
• LPMD format (lpmd)
  • Read Options
  • Write Options
• MDFF format (CONTFF, MDFF, POSFF)
  • Write Options
• MacroModel format (mmd, mmod)
• SIESTA format (siesta)
• The LAMMPS data format (lmpdat)
  • Write Options
• Tinker XYZ format (txyz)
  • Read Options
  • Write Options
• XTC format (xtc)