- ParseLine()
: OBBondTyper
, OBGlobalDataBase
, OBIsotopeTable
, OBRotorRules
, OBAtomTyper
, OBTypeTable
, OBAromaticTyper
, OBRingTyper
, OBElementTable
, OBResidueData
, OBPhModel
- ParseParamFile()
: OBForceField
- ParsePredicate()
: OBDescriptor
- PathSize()
: OBRing
- PathToRoot()
: OBRTree
- patty()
: patty
- PerceiveBondOrders()
: OBMol
- PerceiveChains()
: OBChainsParser
- PerceiveKekuleBonds()
: OBMol
- PlaneReflection()
: matrix3x3
- PluginMap()
: OBPlugin
- PointIsInBox()
: OBGrid
- PolarGrid()
: OBProxGrid
- Precalc()
: OBRotor
- Precompute()
: OBRotor
- Predict()
: OBDescriptor
, OBGroupContrib
- PredictAndSave()
: OBDescriptor
- PrintFormalCharges()
: OBForceField
- PrintPartialCharges()
: OBForceField
- PrintTypes()
: OBForceField
- PrintVector()
: OBForceField
- PrintVelocities()
: OBForceField
- PropagatePotentialAromatic()
: OBAromaticTyper
- PushBack()
: OBRingData